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Estimating telomere length from whole genome sequence data
Journal article   Open access  Peer reviewed

Estimating telomere length from whole genome sequence data

Zhihao Ding, Massimo Mangino, Abraham Aviv, Tim Spector, Richard Durbin and UK10K Consortium
Nucleic acids research, Vol.42(9), pp.e75-e75
05/2014
PMCID: PMC4027178
PMID: 24609383

Abstract

Cross-Sectional Studies Humans Middle Aged Leukocytes - physiology Sequence Analysis, DNA Telomere Homeostasis Exome Base Sequence Repetitive Sequences, Nucleic Acid Adult Aged Models, Genetic Software Genome, Human Telomere - genetics
Telomeres play a key role in replicative ageing and undergo age-dependent attrition in vivo. Here, we report a novel method, TelSeq, to measure average telomere length from whole genome or exome shotgun sequence data. In 260 leukocyte samples, we show that TelSeq results correlate with Southern blot measurements of the mean length of terminal restriction fragments (mTRFs) and display age-dependent attrition comparably well as mTRFs.
url
https://doi.org/10.1093/nar/gku181View
Version of Record (VoR) Open

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